Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 AW822252-206ENSMUST00000208904 237 ntBASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Npc1l1Q6T3U4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Npc1l1Q6T3U4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Npc1l1Q6T3U4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.77■□□□□ 0.75
Npc1l1Q6T3U4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Gm13312-201ENSMUST00000119631 718 ntBASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Gm11452-201ENSMUST00000122376 690 ntBASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Npc1l1Q6T3U4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Gm44430-201ENSMUST00000203376 995 ntBASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1l1Q6T3U4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Npc1l1Q6T3U4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Gm10052-201ENSMUST00000168019 960 ntBASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Gm7729-201ENSMUST00000050143 801 ntBASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1l1Q6T3U4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms