Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Gm8493-201ENSMUST00000196881 489 ntBASIC17.7■□□□□ 0.42
CtifQ6PEE2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Reep4-203ENSMUST00000226563 1444 ntBASIC17.7■□□□□ 0.42
CtifQ6PEE2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.7■□□□□ 0.42
CtifQ6PEE2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.69■□□□□ 0.42
CtifQ6PEE2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CtifQ6PEE2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.69■□□□□ 0.42
CtifQ6PEE2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CtifQ6PEE2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Zfp783-201ENSMUST00000095946 670 ntBASIC17.68■□□□□ 0.42
CtifQ6PEE2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CtifQ6PEE2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.67■□□□□ 0.42
CtifQ6PEE2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CtifQ6PEE2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CtifQ6PEE2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms