Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 AV026068-213ENSMUST00000223675 1171 ntBASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Gm14494-201ENSMUST00000118786 435 ntBASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Snrnp40Q6PE01 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Snrnp40Q6PE01 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Snrnp40Q6PE01 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.52□□□□□ -0.08
Snrnp40Q6PE01 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Snrnp40Q6PE01 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Snrnp40Q6PE01 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Snrnp40Q6PE01 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Snrnp40Q6PE01 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Gm6550-201ENSMUST00000187574 993 ntBASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Snrnp40Q6PE01 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Gm23935-201ENSMUST00000102303 57 ntBASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Gm24270-201ENSMUST00000102326 57 ntBASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Gm14140-201ENSMUST00000119999 995 ntBASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Gm24245-201ENSMUST00000157318 57 ntBASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Gm6089-201ENSMUST00000197666 938 ntBASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Snrnp40Q6PE01 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms