Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rnf220Q6PDX6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf220Q6PDX6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Gm18284-201ENSMUST00000172604 624 ntBASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Gm6365-201ENSMUST00000054711 744 ntBASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf220Q6PDX6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.71■□□□□ 0.1
Rnf220Q6PDX6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Rnf220Q6PDX6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf220Q6PDX6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf220Q6PDX6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.71■□□□□ 0.1
Rnf220Q6PDX6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf220Q6PDX6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.71■□□□□ 0.1
Rnf220Q6PDX6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Gm6211-202ENSMUST00000167849 925 ntBASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf220Q6PDX6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms