Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Gm18958-201ENSMUST00000174258 762 ntBASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga7Q6DD96 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Gm3375-201ENSMUST00000203929 796 ntBASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Odf3b-204ENSMUST00000227834 930 ntBASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga7Q6DD96 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga7Q6DD96 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga7Q6DD96 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms