Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Col7a1Q63870 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col7a1Q63870 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm22065-201ENSMUST00000103753 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm22066-201ENSMUST00000103761 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm24932-201ENSMUST00000103763 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm24115-201ENSMUST00000103799 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm22190-201ENSMUST00000103827 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm22191-201ENSMUST00000103831 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm24721-201ENSMUST00000103849 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm28018-201ENSMUST00000103869 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm26399-201ENSMUST00000103937 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm25349-201ENSMUST00000177728 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm23616-201ENSMUST00000177797 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm25871-201ENSMUST00000177816 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm24752-201ENSMUST00000178240 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm24496-201ENSMUST00000178287 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm25649-201ENSMUST00000178476 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm25548-201ENSMUST00000178681 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm23147-201ENSMUST00000178841 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm26095-201ENSMUST00000179270 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm22171-201ENSMUST00000179283 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm23936-201ENSMUST00000179354 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm22619-201ENSMUST00000179516 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm25255-201ENSMUST00000179579 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm24755-201ENSMUST00000179691 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm26506-201ENSMUST00000179692 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm25086-201ENSMUST00000179931 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm23243-201ENSMUST00000180047 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm24659-201ENSMUST00000180212 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm24169-201ENSMUST00000180244 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm23689-201ENSMUST00000180354 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm27359-201ENSMUST00000184153 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm27785-201ENSMUST00000184268 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm27466-201ENSMUST00000184396 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm27703-201ENSMUST00000184836 110 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col7a1Q63870 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.68□□□□□ -0.22
Col7a1Q63870 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col7a1Q63870 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Gm5177-201ENSMUST00000183092 997 ntBASIC13.67□□□□□ -0.22
Col7a1Q63870 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.67□□□□□ -0.22
Col7a1Q63870 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.67□□□□□ -0.22
Col7a1Q63870 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.67□□□□□ -0.22
Col7a1Q63870 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col7a1Q63870 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col7a1Q63870 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col7a1Q63870 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.66□□□□□ -0.22
Col7a1Q63870 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms