Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptch1Q61115 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC23.78■■□□□ 1.4
Ptch1Q61115 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptch1Q61115 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC23.77■■□□□ 1.4
Ptch1Q61115 Gm17271-201ENSMUST00000165535 355 ntBASIC23.77■■□□□ 1.4
Ptch1Q61115 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptch1Q61115 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ptch1Q61115 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ptch1Q61115 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptch1Q61115 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ptch1Q61115 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ptch1Q61115 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptch1Q61115 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ptch1Q61115 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch1Q61115 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC23.76■■□□□ 1.39
Ptch1Q61115 Gm8825-201ENSMUST00000182565 998 ntBASIC23.76■■□□□ 1.39
Ptch1Q61115 Gm37153-201ENSMUST00000193637 231 ntBASIC23.76■■□□□ 1.39
Ptch1Q61115 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch1Q61115 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch1Q61115 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC23.76■■□□□ 1.39
Ptch1Q61115 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Ptch1Q61115 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch1Q61115 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch1Q61115 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ptch1Q61115 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch1Q61115 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch1Q61115 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Ptch1Q61115 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC23.76■■□□□ 1.39
Ptch1Q61115 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch1Q61115 Gm27494-201ENSMUST00000184735 189 ntBASIC23.76■■□□□ 1.39
Ptch1Q61115 Gm20949-201ENSMUST00000206478 952 ntBASIC23.76■■□□□ 1.39
Ptch1Q61115 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch1Q61115 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ptch1Q61115 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Ptch1Q61115 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Ptch1Q61115 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ptch1Q61115 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ptch1Q61115 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Ptch1Q61115 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC23.75■■□□□ 1.39
Ptch1Q61115 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ptch1Q61115 AC147366.1-201ENSMUST00000227671 852 ntBASIC23.75■■□□□ 1.39
Ptch1Q61115 AC117588.1-201ENSMUST00000228510 999 ntBASIC23.75■■□□□ 1.39
Ptch1Q61115 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ptch1Q61115 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC23.74■■□□□ 1.39
Ptch1Q61115 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC23.74■■□□□ 1.39
Ptch1Q61115 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC23.74■■□□□ 1.39
Ptch1Q61115 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ptch1Q61115 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptch1Q61115 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ptch1Q61115 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC23.73■■□□□ 1.39
Ptch1Q61115 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Ptch1Q61115 Mir6404-201ENSMUST00000183699 94 ntBASIC23.73■■□□□ 1.39
Ptch1Q61115 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 AC155252.2-201ENSMUST00000226946 680 ntBASIC23.73■■□□□ 1.39
Ptch1Q61115 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptch1Q61115 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptch1Q61115 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptch1Q61115 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Ptch1Q61115 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Ptch1Q61115 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ptch1Q61115 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
Ptch1Q61115 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Ptch1Q61115 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC23.72■■□□□ 1.39
Ptch1Q61115 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC23.72■■□□□ 1.39
Ptch1Q61115 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC23.72■■□□□ 1.39
Ptch1Q61115 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptch1Q61115 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptch1Q61115 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptch1Q61115 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC23.71■■□□□ 1.39
Ptch1Q61115 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptch1Q61115 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptch1Q61115 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC23.71■■□□□ 1.39
Ptch1Q61115 Gm43438-201ENSMUST00000198133 379 ntBASIC23.71■■□□□ 1.39
Ptch1Q61115 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptch1Q61115 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptch1Q61115 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC23.71■■□□□ 1.39
Ptch1Q61115 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ptch1Q61115 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ptch1Q61115 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ptch1Q61115 Mir1895-201ENSMUST00000122615 79 ntBASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms