Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.14■□□□□ 0.17
Sim2Q61079 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sim2Q61079 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sim2Q61079 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.13■□□□□ 0.17
Sim2Q61079 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.13■□□□□ 0.17
Sim2Q61079 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.13■□□□□ 0.17
Sim2Q61079 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.13■□□□□ 0.17
Sim2Q61079 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.13■□□□□ 0.17
Sim2Q61079 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.13■□□□□ 0.17
Sim2Q61079 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.13■□□□□ 0.17
Sim2Q61079 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.13■□□□□ 0.17
Sim2Q61079 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.13■□□□□ 0.17
Sim2Q61079 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.13■□□□□ 0.17
Sim2Q61079 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Sim2Q61079 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sim2Q61079 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sim2Q61079 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sim2Q61079 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim2Q61079 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sim2Q61079 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.12■□□□□ 0.17
Sim2Q61079 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Gm4995-201ENSMUST00000117247 432 ntBASIC16.12■□□□□ 0.17
Sim2Q61079 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.12■□□□□ 0.17
Sim2Q61079 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.12■□□□□ 0.17
Sim2Q61079 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Sim2Q61079 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.12■□□□□ 0.17
Sim2Q61079 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.12■□□□□ 0.17
Sim2Q61079 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Sim2Q61079 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim2Q61079 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Sim2Q61079 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.11■□□□□ 0.17
Sim2Q61079 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.11■□□□□ 0.17
Sim2Q61079 Gm26308-201ENSMUST00000157768 69 ntBASIC16.11■□□□□ 0.17
Sim2Q61079 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Gm6550-201ENSMUST00000187574 993 ntBASIC16.11■□□□□ 0.17
Sim2Q61079 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Sim2Q61079 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Sim2Q61079 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Sim2Q61079 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sim2Q61079 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sim2Q61079 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sim2Q61079 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sim2Q61079 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sim2Q61079 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sim2Q61079 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sim2Q61079 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sim2Q61079 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sim2Q61079 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sim2Q61079 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms