Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc27Q3V036 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Gm8520-201ENSMUST00000186517 868 ntBASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Gm37025-201ENSMUST00000195159 829 ntBASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc27Q3V036 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc27Q3V036 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc27Q3V036 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc27Q3V036 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.04■□□□□ 0.96
Ccdc27Q3V036 Gm17661-201ENSMUST00000170317 270 ntBASIC21.04■□□□□ 0.96
Ccdc27Q3V036 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.04■□□□□ 0.96
Ccdc27Q3V036 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc27Q3V036 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc27Q3V036 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc27Q3V036 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc27Q3V036 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc27Q3V036 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc27Q3V036 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc27Q3V036 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc27Q3V036 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc27Q3V036 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc27Q3V036 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.03■□□□□ 0.96
Ccdc27Q3V036 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.03■□□□□ 0.96
Ccdc27Q3V036 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.03■□□□□ 0.96
Ccdc27Q3V036 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc27Q3V036 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc27Q3V036 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc27Q3V036 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Gm12085-201ENSMUST00000119263 940 ntBASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc27Q3V036 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc27Q3V036 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Ccdc27Q3V036 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc27Q3V036 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc27Q3V036 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms