Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28047Q3US59 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28047Q3US59 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.84■□□□□ 0.61
Gm28047Q3US59 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28047Q3US59 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28047Q3US59 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28047Q3US59 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.83■□□□□ 0.61
Gm28047Q3US59 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28047Q3US59 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28047Q3US59 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28047Q3US59 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28047Q3US59 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28047Q3US59 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28047Q3US59 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.83■□□□□ 0.6
Gm28047Q3US59 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28047Q3US59 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.82■□□□□ 0.6
Gm28047Q3US59 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28047Q3US59 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Gm13559-201ENSMUST00000120476 863 ntBASIC18.81■□□□□ 0.6
Gm28047Q3US59 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28047Q3US59 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.8■□□□□ 0.6
Gm28047Q3US59 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Gm7213-201ENSMUST00000215977 950 ntBASIC18.8■□□□□ 0.6
Gm28047Q3US59 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28047Q3US59 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28047Q3US59 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28047Q3US59 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28047Q3US59 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28047Q3US59 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28047Q3US59 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28047Q3US59 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms