Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Hspg2Q05793 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hspg2Q05793 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.16□□□□□ -0.46
Hspg2Q05793 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hspg2Q05793 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.16□□□□□ -0.46
Hspg2Q05793 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.15□□□□□ -0.46
Hspg2Q05793 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hspg2Q05793 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.15□□□□□ -0.46
Hspg2Q05793 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.15□□□□□ -0.46
Hspg2Q05793 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Hspg2Q05793 Mir8117-201ENSMUST00000184773 107 ntBASIC12.15□□□□□ -0.46
Hspg2Q05793 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.15□□□□□ -0.46
Hspg2Q05793 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Gm6089-201ENSMUST00000197666 938 ntBASIC12.15□□□□□ -0.46
Hspg2Q05793 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.15□□□□□ -0.46
Hspg2Q05793 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hspg2Q05793 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Hspg2Q05793 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Hspg2Q05793 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hspg2Q05793 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hspg2Q05793 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Hspg2Q05793 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.14□□□□□ -0.47
Hspg2Q05793 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.14□□□□□ -0.47
Hspg2Q05793 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.14□□□□□ -0.47
Hspg2Q05793 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.14□□□□□ -0.47
Hspg2Q05793 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.14□□□□□ -0.47
Hspg2Q05793 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hspg2Q05793 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.14□□□□□ -0.47
Hspg2Q05793 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hspg2Q05793 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.14□□□□□ -0.47
Hspg2Q05793 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.14□□□□□ -0.47
Hspg2Q05793 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hspg2Q05793 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.13□□□□□ -0.47
Hspg2Q05793 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.13□□□□□ -0.47
Hspg2Q05793 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.13□□□□□ -0.47
Hspg2Q05793 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hspg2Q05793 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.13□□□□□ -0.47
Hspg2Q05793 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.13□□□□□ -0.47
Hspg2Q05793 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms