Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a1Q00780 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a1Q00780 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a1Q00780 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.09□□□□□ -0.15
Col8a1Q00780 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a1Q00780 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col8a1Q00780 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Col8a1Q00780 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Col8a1Q00780 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.08□□□□□ -0.16
Col8a1Q00780 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.08□□□□□ -0.16
Col8a1Q00780 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col8a1Q00780 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.08□□□□□ -0.16
Col8a1Q00780 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col8a1Q00780 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Col8a1Q00780 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col8a1Q00780 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.07□□□□□ -0.16
Col8a1Q00780 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.07□□□□□ -0.16
Col8a1Q00780 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Gm15590-201ENSMUST00000078419 552 ntBASIC14.07□□□□□ -0.16
Col8a1Q00780 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.07□□□□□ -0.16
Col8a1Q00780 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col8a1Q00780 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Col8a1Q00780 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.06□□□□□ -0.16
Col8a1Q00780 Fst-202ENSMUST00000223640 2612 ntBASIC14.06□□□□□ -0.16
Col8a1Q00780 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Gm13186-201ENSMUST00000118031 316 ntBASIC14.06□□□□□ -0.16
Col8a1Q00780 Gm13312-201ENSMUST00000119631 718 ntBASIC14.06□□□□□ -0.16
Col8a1Q00780 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.06□□□□□ -0.16
Col8a1Q00780 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.06□□□□□ -0.16
Col8a1Q00780 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col8a1Q00780 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a1Q00780 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a1Q00780 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms