Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.67■□□□□ 0.9
Smarcc1P97496 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.67■□□□□ 0.9
Smarcc1P97496 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc1P97496 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smarcc1P97496 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smarcc1P97496 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc1P97496 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc1P97496 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Smarcc1P97496 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc1P97496 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc1P97496 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc1P97496 Rarb-207ENSMUST00000225921 2756 ntBASIC20.66■□□□□ 0.9
Smarcc1P97496 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.66■□□□□ 0.9
Smarcc1P97496 Gm8097-201ENSMUST00000117903 829 ntBASIC20.66■□□□□ 0.9
Smarcc1P97496 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Smarcc1P97496 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Smarcc1P97496 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc1P97496 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Smarcc1P97496 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc1P97496 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.66■□□□□ 0.9
Smarcc1P97496 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.66■□□□□ 0.9
Smarcc1P97496 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Smarcc1P97496 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc1P97496 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc1P97496 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Smarcc1P97496 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc1P97496 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Gm14822-201ENSMUST00000122247 291 ntBASIC20.65■□□□□ 0.9
Smarcc1P97496 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.65■□□□□ 0.9
Smarcc1P97496 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc1P97496 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.64■□□□□ 0.9
Smarcc1P97496 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Smarcc1P97496 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarcc1P97496 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc1P97496 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.64■□□□□ 0.89
Smarcc1P97496 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc1P97496 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc1P97496 Gm9727-201ENSMUST00000161387 555 ntBASIC20.64■□□□□ 0.89
Smarcc1P97496 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.64■□□□□ 0.89
Smarcc1P97496 Gm27628-201ENSMUST00000184911 107 ntBASIC20.64■□□□□ 0.89
Smarcc1P97496 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Smarcc1P97496 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.64■□□□□ 0.89
Smarcc1P97496 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc1P97496 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc1P97496 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.64■□□□□ 0.89
Smarcc1P97496 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc1P97496 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Smarcc1P97496 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc1P97496 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc1P97496 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc1P97496 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc1P97496 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc1P97496 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc1P97496 Gm13036-201ENSMUST00000117799 748 ntBASIC20.63■□□□□ 0.89
Smarcc1P97496 Gm4459-201ENSMUST00000118750 468 ntBASIC20.63■□□□□ 0.89
Smarcc1P97496 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.63■□□□□ 0.89
Smarcc1P97496 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.63■□□□□ 0.89
Smarcc1P97496 Gm12497-201ENSMUST00000138778 237 ntBASIC20.63■□□□□ 0.89
Smarcc1P97496 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smarcc1P97496 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc1P97496 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc1P97496 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smarcc1P97496 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Smarcc1P97496 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc1P97496 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc1P97496 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc1P97496 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Smarcc1P97496 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.62■□□□□ 0.89
Smarcc1P97496 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc1P97496 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc1P97496 Gm11780-201ENSMUST00000136880 516 ntBASIC20.62■□□□□ 0.89
Smarcc1P97496 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.62■□□□□ 0.89
Smarcc1P97496 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.62■□□□□ 0.89
Smarcc1P97496 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc1P97496 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc1P97496 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.62■□□□□ 0.89
Smarcc1P97496 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc1P97496 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.62■□□□□ 0.89
Smarcc1P97496 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smarcc1P97496 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc1P97496 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Smarcc1P97496 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Smarcc1P97496 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.61■□□□□ 0.89
Smarcc1P97496 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc1P97496 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc1P97496 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smarcc1P97496 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Smarcc1P97496 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc1P97496 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.61■□□□□ 0.89
Smarcc1P97496 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.61■□□□□ 0.89
Smarcc1P97496 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms