Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.92□□□□□ -0.18
SgcaP82350 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SgcaP82350 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.91□□□□□ -0.18
SgcaP82350 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SgcaP82350 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.91□□□□□ -0.18
SgcaP82350 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.91□□□□□ -0.18
SgcaP82350 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Gm6365-201ENSMUST00000054711 744 ntBASIC13.91□□□□□ -0.18
SgcaP82350 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.91□□□□□ -0.18
SgcaP82350 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SgcaP82350 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
SgcaP82350 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SgcaP82350 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SgcaP82350 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.9□□□□□ -0.18
SgcaP82350 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SgcaP82350 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.9□□□□□ -0.18
SgcaP82350 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.9□□□□□ -0.18
SgcaP82350 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.9□□□□□ -0.18
SgcaP82350 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SgcaP82350 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
SgcaP82350 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcaP82350 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
SgcaP82350 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.89□□□□□ -0.19
SgcaP82350 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
SgcaP82350 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SgcaP82350 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SgcaP82350 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SgcaP82350 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SgcaP82350 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SgcaP82350 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SgcaP82350 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SgcaP82350 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.89□□□□□ -0.19
SgcaP82350 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SgcaP82350 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcaP82350 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcaP82350 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.88□□□□□ -0.19
SgcaP82350 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcaP82350 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcaP82350 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcaP82350 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SgcaP82350 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcaP82350 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcaP82350 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms