Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.74■□□□□ 0.27
ThraP63058 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.74■□□□□ 0.27
ThraP63058 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Gm25016-201ENSMUST00000158399 131 ntBASIC16.74■□□□□ 0.27
ThraP63058 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ThraP63058 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.74■□□□□ 0.27
ThraP63058 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Gm9731-201ENSMUST00000209480 747 ntBASIC16.74■□□□□ 0.27
ThraP63058 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
ThraP63058 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
ThraP63058 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.73■□□□□ 0.27
ThraP63058 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.73■□□□□ 0.27
ThraP63058 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.73■□□□□ 0.27
ThraP63058 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Il3ra-202ENSMUST00000223589 738 ntBASIC16.73■□□□□ 0.27
ThraP63058 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
ThraP63058 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ThraP63058 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.72■□□□□ 0.27
ThraP63058 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.72■□□□□ 0.27
ThraP63058 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ThraP63058 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ThraP63058 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ThraP63058 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ThraP63058 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ThraP63058 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ThraP63058 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
ThraP63058 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ThraP63058 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ThraP63058 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.71■□□□□ 0.27
ThraP63058 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ThraP63058 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.71■□□□□ 0.27
ThraP63058 Gm14859-201ENSMUST00000117752 357 ntBASIC16.71■□□□□ 0.27
ThraP63058 Mir1668-201ENSMUST00000184114 107 ntBASIC16.71■□□□□ 0.27
ThraP63058 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.71■□□□□ 0.27
ThraP63058 Gm21559-201ENSMUST00000220638 855 ntBASIC16.71■□□□□ 0.27
ThraP63058 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ThraP63058 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ThraP63058 Gm8587-201ENSMUST00000076538 843 ntBASIC16.71■□□□□ 0.27
ThraP63058 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ThraP63058 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ThraP63058 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ThraP63058 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ThraP63058 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ThraP63058 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
ThraP63058 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ThraP63058 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ThraP63058 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ThraP63058 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.7■□□□□ 0.26
ThraP63058 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ThraP63058 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ThraP63058 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
ThraP63058 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ThraP63058 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ThraP63058 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms