Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Gm7889-201ENSMUST00000185591 958 ntBASIC14.5□□□□□ -0.09
Lsm6P62313 Gm44450-201ENSMUST00000199528 114 ntBASIC14.5□□□□□ -0.09
Lsm6P62313 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.5□□□□□ -0.09
Lsm6P62313 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.5□□□□□ -0.09
Lsm6P62313 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.5□□□□□ -0.09
Lsm6P62313 Gm10252-201ENSMUST00000209541 832 ntBASIC14.5□□□□□ -0.09
Lsm6P62313 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.5□□□□□ -0.09
Lsm6P62313 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Lsm6P62313 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Lsm6P62313 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.49□□□□□ -0.09
Lsm6P62313 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.49□□□□□ -0.09
Lsm6P62313 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Lsm6P62313 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.49□□□□□ -0.09
Lsm6P62313 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Lsm6P62313 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.49□□□□□ -0.09
Lsm6P62313 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Lsm6P62313 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lsm6P62313 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lsm6P62313 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm6P62313 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Lsm6P62313 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.48□□□□□ -0.09
Lsm6P62313 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Lsm6P62313 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Lsm6P62313 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.48□□□□□ -0.09
Lsm6P62313 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm6P62313 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Lsm6P62313 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.48□□□□□ -0.09
Lsm6P62313 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.47□□□□□ -0.09
Lsm6P62313 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.47□□□□□ -0.09
Lsm6P62313 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.47□□□□□ -0.09
Lsm6P62313 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lsm6P62313 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Lsm6P62313 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm6P62313 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms