Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sf3b6P59708 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.7□□□□□ -0.06
Sf3b6P59708 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Gm27000-201ENSMUST00000182943 842 ntBASIC14.7□□□□□ -0.06
Sf3b6P59708 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Sf3b6P59708 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.7□□□□□ -0.06
Sf3b6P59708 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.7□□□□□ -0.06
Sf3b6P59708 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sf3b6P59708 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Sf3b6P59708 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3b6P59708 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sf3b6P59708 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sf3b6P59708 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sf3b6P59708 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sf3b6P59708 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.69□□□□□ -0.06
Sf3b6P59708 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Gm13168-201ENSMUST00000121771 632 ntBASIC14.69□□□□□ -0.06
Sf3b6P59708 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.69□□□□□ -0.06
Sf3b6P59708 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Gm27275-201ENSMUST00000184318 272 ntBASIC14.69□□□□□ -0.06
Sf3b6P59708 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.69□□□□□ -0.06
Sf3b6P59708 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3b6P59708 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Sf3b6P59708 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.68□□□□□ -0.06
Sf3b6P59708 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.68□□□□□ -0.06
Sf3b6P59708 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.68□□□□□ -0.06
Sf3b6P59708 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Gm22240-201ENSMUST00000175225 82 ntBASIC14.68□□□□□ -0.06
Sf3b6P59708 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.68□□□□□ -0.06
Sf3b6P59708 Gm18666-201ENSMUST00000190039 958 ntBASIC14.68□□□□□ -0.06
Sf3b6P59708 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Sf3b6P59708 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sf3b6P59708 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Sf3b6P59708 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sf3b6P59708 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b6P59708 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Sf3b6P59708 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b6P59708 Gm18025-201ENSMUST00000221733 862 ntBASIC14.67□□□□□ -0.06
Sf3b6P59708 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sf3b6P59708 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b6P59708 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b6P59708 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b6P59708 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b6P59708 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b6P59708 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b6P59708 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b6P59708 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b6P59708 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b6P59708 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b6P59708 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b6P59708 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Sf3b6P59708 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b6P59708 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sf3b6P59708 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b6P59708 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b6P59708 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b6P59708 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms