Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd3P55096 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd3P55096 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd3P55096 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.8□□□□□ -0.04
Abcd3P55096 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.8□□□□□ -0.04
Abcd3P55096 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.8□□□□□ -0.04
Abcd3P55096 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd3P55096 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Abcd3P55096 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Abcd3P55096 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.79□□□□□ -0.04
Abcd3P55096 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Abcd3P55096 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.79□□□□□ -0.04
Abcd3P55096 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.79□□□□□ -0.04
Abcd3P55096 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.79□□□□□ -0.04
Abcd3P55096 Gm7889-201ENSMUST00000185591 958 ntBASIC14.79□□□□□ -0.04
Abcd3P55096 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.79□□□□□ -0.04
Abcd3P55096 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.79□□□□□ -0.04
Abcd3P55096 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.79□□□□□ -0.04
Abcd3P55096 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.79□□□□□ -0.04
Abcd3P55096 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd3P55096 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.79□□□□□ -0.04
Abcd3P55096 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.78□□□□□ -0.04
Abcd3P55096 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Abcd3P55096 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Abcd3P55096 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.78□□□□□ -0.04
Abcd3P55096 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.78□□□□□ -0.04
Abcd3P55096 Gm44450-201ENSMUST00000199528 114 ntBASIC14.78□□□□□ -0.04
Abcd3P55096 Gm43799-201ENSMUST00000201845 579 ntBASIC14.78□□□□□ -0.04
Abcd3P55096 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Abcd3P55096 Gm10566-201ENSMUST00000086739 996 ntBASIC14.78□□□□□ -0.04
Abcd3P55096 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Abcd3P55096 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Abcd3P55096 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.78□□□□□ -0.04
Abcd3P55096 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.78□□□□□ -0.04
Abcd3P55096 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Abcd3P55096 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.78□□□□□ -0.04
Abcd3P55096 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Abcd3P55096 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd3P55096 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abcd3P55096 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abcd3P55096 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abcd3P55096 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.77□□□□□ -0.04
Abcd3P55096 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.77□□□□□ -0.04
Abcd3P55096 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abcd3P55096 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Abcd3P55096 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abcd3P55096 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Abcd3P55096 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abcd3P55096 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Abcd3P55096 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abcd3P55096 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.77□□□□□ -0.05
Abcd3P55096 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abcd3P55096 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abcd3P55096 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Abcd3P55096 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abcd3P55096 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abcd3P55096 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abcd3P55096 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abcd3P55096 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms