Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh6P54276 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Msh6P54276 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh6P54276 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Msh6P54276 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Msh6P54276 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Msh6P54276 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh6P54276 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh6P54276 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Msh6P54276 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Msh6P54276 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh6P54276 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh6P54276 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh6P54276 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Msh6P54276 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh6P54276 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Msh6P54276 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Msh6P54276 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh6P54276 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Msh6P54276 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.92■□□□□ 0.94
Msh6P54276 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.92■□□□□ 0.94
Msh6P54276 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Msh6P54276 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh6P54276 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh6P54276 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Msh6P54276 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Msh6P54276 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msh6P54276 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msh6P54276 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Msh6P54276 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msh6P54276 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.91■□□□□ 0.94
Msh6P54276 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Msh6P54276 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.91■□□□□ 0.94
Msh6P54276 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.91■□□□□ 0.94
Msh6P54276 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh6P54276 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Msh6P54276 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh6P54276 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.9■□□□□ 0.94
Msh6P54276 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh6P54276 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Msh6P54276 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh6P54276 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.9■□□□□ 0.94
Msh6P54276 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Msh6P54276 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh6P54276 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.9■□□□□ 0.94
Msh6P54276 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh6P54276 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.9■□□□□ 0.94
Msh6P54276 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.9■□□□□ 0.94
Msh6P54276 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh6P54276 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh6P54276 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.9■□□□□ 0.94
Msh6P54276 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Msh6P54276 Gm13216-201ENSMUST00000117145 591 ntBASIC20.89■□□□□ 0.93
Msh6P54276 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh6P54276 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Msh6P54276 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh6P54276 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh6P54276 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh6P54276 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Msh6P54276 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Msh6P54276 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh6P54276 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh6P54276 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.89■□□□□ 0.93
Msh6P54276 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh6P54276 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh6P54276 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh6P54276 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Msh6P54276 Gm25990-201ENSMUST00000102440 86 ntBASIC20.88■□□□□ 0.93
Msh6P54276 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh6P54276 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh6P54276 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Msh6P54276 Gm5264-201ENSMUST00000190584 848 ntBASIC20.88■□□□□ 0.93
Msh6P54276 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.88■□□□□ 0.93
Msh6P54276 Psmb5-202ENSMUST00000227257 622 ntBASIC20.88■□□□□ 0.93
Msh6P54276 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh6P54276 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh6P54276 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Msh6P54276 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Msh6P54276 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh6P54276 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh6P54276 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Msh6P54276 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.87■□□□□ 0.93
Msh6P54276 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.87■□□□□ 0.93
Msh6P54276 Gm36967-201ENSMUST00000193814 266 ntBASIC20.87■□□□□ 0.93
Msh6P54276 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.87■□□□□ 0.93
Msh6P54276 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh6P54276 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.87■□□□□ 0.93
Msh6P54276 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh6P54276 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh6P54276 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh6P54276 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh6P54276 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh6P54276 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh6P54276 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.86■□□□□ 0.93
Msh6P54276 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Msh6P54276 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.86■□□□□ 0.93
Msh6P54276 Gm7230-201ENSMUST00000173026 815 ntBASIC20.86■□□□□ 0.93
Msh6P54276 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.86■□□□□ 0.93
Msh6P54276 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms