Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cd9P40240 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cd9P40240 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.32■□□□□ 0.2
Cd9P40240 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Cd9P40240 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.32■□□□□ 0.2
Cd9P40240 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.32■□□□□ 0.2
Cd9P40240 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.32■□□□□ 0.2
Cd9P40240 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.32■□□□□ 0.2
Cd9P40240 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Cd9P40240 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cd9P40240 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cd9P40240 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd9P40240 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Cd9P40240 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cd9P40240 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.31■□□□□ 0.2
Cd9P40240 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.31■□□□□ 0.2
Cd9P40240 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cd9P40240 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.31■□□□□ 0.2
Cd9P40240 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.31■□□□□ 0.2
Cd9P40240 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cd9P40240 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cd9P40240 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.31■□□□□ 0.2
Cd9P40240 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd9P40240 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cd9P40240 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cd9P40240 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cd9P40240 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.3■□□□□ 0.2
Cd9P40240 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.3■□□□□ 0.2
Cd9P40240 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.3■□□□□ 0.2
Cd9P40240 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd9P40240 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.29■□□□□ 0.2
Cd9P40240 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
Cd9P40240 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.29■□□□□ 0.2
Cd9P40240 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cd9P40240 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.29■□□□□ 0.2
Cd9P40240 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd9P40240 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Cd9P40240 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd9P40240 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd9P40240 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd9P40240 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd9P40240 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd9P40240 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd9P40240 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd9P40240 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms