Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.97■□□□□ 0.63
Vcam1P29533 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.97■□□□□ 0.63
Vcam1P29533 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcam1P29533 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vcam1P29533 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.96■□□□□ 0.63
Vcam1P29533 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Vcam1P29533 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vcam1P29533 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcam1P29533 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcam1P29533 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Vcam1P29533 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.96■□□□□ 0.63
Vcam1P29533 Gm27525-201ENSMUST00000184465 107 ntBASIC18.96■□□□□ 0.63
Vcam1P29533 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.96■□□□□ 0.63
Vcam1P29533 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.96■□□□□ 0.63
Vcam1P29533 Gm10060-201ENSMUST00000212002 111 ntBASIC18.96■□□□□ 0.63
Vcam1P29533 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.96■□□□□ 0.63
Vcam1P29533 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.96■□□□□ 0.63
Vcam1P29533 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vcam1P29533 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vcam1P29533 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcam1P29533 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcam1P29533 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.96■□□□□ 0.63
Vcam1P29533 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcam1P29533 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcam1P29533 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Vcam1P29533 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vcam1P29533 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vcam1P29533 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcam1P29533 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vcam1P29533 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcam1P29533 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Vcam1P29533 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcam1P29533 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcam1P29533 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Vcam1P29533 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vcam1P29533 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcam1P29533 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.94■□□□□ 0.62
Vcam1P29533 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.94■□□□□ 0.62
Vcam1P29533 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Vcam1P29533 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.94■□□□□ 0.62
Vcam1P29533 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcam1P29533 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.93■□□□□ 0.62
Vcam1P29533 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.93■□□□□ 0.62
Vcam1P29533 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.93■□□□□ 0.62
Vcam1P29533 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Gm25990-201ENSMUST00000102440 86 ntBASIC18.93■□□□□ 0.62
Vcam1P29533 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Gm13418-201ENSMUST00000119097 944 ntBASIC18.93■□□□□ 0.62
Vcam1P29533 Gm12350-201ENSMUST00000121208 462 ntBASIC18.93■□□□□ 0.62
Vcam1P29533 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.93■□□□□ 0.62
Vcam1P29533 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.93■□□□□ 0.62
Vcam1P29533 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vcam1P29533 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.93■□□□□ 0.62
Vcam1P29533 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcam1P29533 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vcam1P29533 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms