Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm43347-201ENSMUST00000200226 580 ntBASIC18■□□□□ 0.47
Pde6bP23440 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pde6bP23440 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18■□□□□ 0.47
Pde6bP23440 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Pde6bP23440 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pde6bP23440 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Gm29707-201ENSMUST00000196325 491 ntBASIC17.99■□□□□ 0.47
Pde6bP23440 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.99■□□□□ 0.47
Pde6bP23440 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6bP23440 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.99■□□□□ 0.47
Pde6bP23440 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pde6bP23440 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Pde6bP23440 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pde6bP23440 Gm5864-201ENSMUST00000202263 970 ntBASIC17.98■□□□□ 0.47
Pde6bP23440 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.98■□□□□ 0.47
Pde6bP23440 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.98■□□□□ 0.47
Pde6bP23440 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Pde6bP23440 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pde6bP23440 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6bP23440 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.98■□□□□ 0.47
Pde6bP23440 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Mir8098-201ENSMUST00000184011 137 ntBASIC17.97■□□□□ 0.47
Pde6bP23440 Gm44450-201ENSMUST00000199528 114 ntBASIC17.97■□□□□ 0.47
Pde6bP23440 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pde6bP23440 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6bP23440 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6bP23440 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.96■□□□□ 0.47
Pde6bP23440 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6bP23440 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pde6bP23440 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pde6bP23440 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6bP23440 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.96■□□□□ 0.47
Pde6bP23440 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.96■□□□□ 0.47
Pde6bP23440 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.96■□□□□ 0.47
Pde6bP23440 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.96■□□□□ 0.47
Pde6bP23440 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6bP23440 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6bP23440 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.96■□□□□ 0.47
Pde6bP23440 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6bP23440 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6bP23440 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6bP23440 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6bP23440 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pde6bP23440 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Pde6bP23440 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6bP23440 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pde6bP23440 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6bP23440 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6bP23440 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6bP23440 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6bP23440 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6bP23440 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6bP23440 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms