Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Hmgn1P18608 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.17■□□□□ 0.02
Hmgn1P18608 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hmgn1P18608 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmgn1P18608 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Gm43183-201ENSMUST00000200632 547 ntBASIC15.16■□□□□ 0.02
Hmgn1P18608 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hmgn1P18608 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hmgn1P18608 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmgn1P18608 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgn1P18608 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.15■□□□□ 0.02
Hmgn1P18608 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.15■□□□□ 0.02
Hmgn1P18608 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.15■□□□□ 0.02
Hmgn1P18608 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hmgn1P18608 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hmgn1P18608 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.15■□□□□ 0.02
Hmgn1P18608 Gm37179-201ENSMUST00000194862 823 ntBASIC15.15■□□□□ 0.02
Hmgn1P18608 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.15■□□□□ 0.02
Hmgn1P18608 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.15■□□□□ 0.02
Hmgn1P18608 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Hmgn1P18608 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.15■□□□□ 0.02
Hmgn1P18608 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Hmgn1P18608 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgn1P18608 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hmgn1P18608 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Hmgn1P18608 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hmgn1P18608 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hmgn1P18608 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.14■□□□□ 0.01
Hmgn1P18608 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.14■□□□□ 0.01
Hmgn1P18608 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Hmgn1P18608 Gm27275-201ENSMUST00000184318 272 ntBASIC15.14■□□□□ 0.01
Hmgn1P18608 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.14■□□□□ 0.01
Hmgn1P18608 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgn1P18608 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Hmgn1P18608 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.13■□□□□ 0.01
Hmgn1P18608 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hmgn1P18608 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hmgn1P18608 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms