Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cd48P18181 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cd48P18181 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Gm7638-201ENSMUST00000121348 967 ntBASIC14.85□□□□□ -0.03
Cd48P18181 Gm13168-201ENSMUST00000121771 632 ntBASIC14.85□□□□□ -0.03
Cd48P18181 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.85□□□□□ -0.03
Cd48P18181 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd48P18181 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Cd48P18181 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd48P18181 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd48P18181 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Gm12085-201ENSMUST00000119263 940 ntBASIC14.84□□□□□ -0.03
Cd48P18181 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cd48P18181 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.84□□□□□ -0.03
Cd48P18181 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.84□□□□□ -0.03
Cd48P18181 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cd48P18181 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cd48P18181 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.84□□□□□ -0.03
Cd48P18181 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd48P18181 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd48P18181 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd48P18181 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd48P18181 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cd48P18181 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd48P18181 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd48P18181 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cd48P18181 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.83□□□□□ -0.04
Cd48P18181 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd48P18181 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Cd48P18181 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cd48P18181 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Mir1199-201ENSMUST00000117015 119 ntBASIC14.82□□□□□ -0.04
Cd48P18181 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Gm18958-201ENSMUST00000174258 762 ntBASIC14.82□□□□□ -0.04
Cd48P18181 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.82□□□□□ -0.04
Cd48P18181 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cd48P18181 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd48P18181 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms