Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.24■□□□□ 0.19
Srp54P14576 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.24■□□□□ 0.19
Srp54P14576 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Gm18421-201ENSMUST00000204122 625 ntBASIC16.24■□□□□ 0.19
Srp54P14576 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Srp54P14576 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.24■□□□□ 0.19
Srp54P14576 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Srp54P14576 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.23■□□□□ 0.19
Srp54P14576 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Srp54P14576 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.23■□□□□ 0.19
Srp54P14576 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.23■□□□□ 0.19
Srp54P14576 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.23■□□□□ 0.19
Srp54P14576 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Srp54P14576 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.23■□□□□ 0.19
Srp54P14576 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Srp54P14576 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srp54P14576 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Srp54P14576 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.22■□□□□ 0.19
Srp54P14576 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.22■□□□□ 0.19
Srp54P14576 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.22■□□□□ 0.19
Srp54P14576 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Srp54P14576 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.22■□□□□ 0.19
Srp54P14576 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Srp54P14576 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Srp54P14576 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Srp54P14576 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srp54P14576 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Srp54P14576 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Srp54P14576 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.21■□□□□ 0.19
Srp54P14576 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Srp54P14576 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Srp54P14576 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Srp54P14576 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Srp54P14576 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.21■□□□□ 0.19
Srp54P14576 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.21■□□□□ 0.19
Srp54P14576 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Srp54P14576 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Srp54P14576 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srp54P14576 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Srp54P14576 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.21■□□□□ 0.18
Srp54P14576 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Srp54P14576 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srp54P14576 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srp54P14576 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Srp54P14576 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srp54P14576 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srp54P14576 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srp54P14576 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms