Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Surf1P09925 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Surf1P09925 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Surf1P09925 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Surf1P09925 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Surf1P09925 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Surf1P09925 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Surf1P09925 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Surf1P09925 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Surf1P09925 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.67■□□□□ 0.58
Surf1P09925 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.67■□□□□ 0.58
Surf1P09925 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.67■□□□□ 0.58
Surf1P09925 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Surf1P09925 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Surf1P09925 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Surf1P09925 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Surf1P09925 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.66■□□□□ 0.58
Surf1P09925 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Gm27389-201ENSMUST00000183622 195 ntBASIC18.66■□□□□ 0.58
Surf1P09925 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Surf1P09925 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Surf1P09925 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Surf1P09925 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Surf1P09925 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Surf1P09925 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.65■□□□□ 0.58
Surf1P09925 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.65■□□□□ 0.58
Surf1P09925 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Surf1P09925 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.65■□□□□ 0.58
Surf1P09925 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.65■□□□□ 0.58
Surf1P09925 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Surf1P09925 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Surf1P09925 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Surf1P09925 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.65■□□□□ 0.58
Surf1P09925 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Surf1P09925 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.64■□□□□ 0.58
Surf1P09925 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Surf1P09925 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Surf1P09925 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Surf1P09925 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Surf1P09925 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Surf1P09925 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Surf1P09925 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Surf1P09925 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.64■□□□□ 0.57
Surf1P09925 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Surf1P09925 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Surf1P09925 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Surf1P09925 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Surf1P09925 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Surf1P09925 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Surf1P09925 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Surf1P09925 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Surf1P09925 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Surf1P09925 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.63■□□□□ 0.57
Surf1P09925 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Surf1P09925 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms