Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PrnpP04925 Gm10355-201ENSMUST00000097146 517 ntBASIC17.14■□□□□ 0.33
PrnpP04925 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PrnpP04925 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PrnpP04925 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PrnpP04925 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PrnpP04925 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PrnpP04925 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PrnpP04925 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PrnpP04925 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PrnpP04925 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.13■□□□□ 0.33
PrnpP04925 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Mir5126-201ENSMUST00000175513 77 ntBASIC17.13■□□□□ 0.33
PrnpP04925 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.13■□□□□ 0.33
PrnpP04925 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.13■□□□□ 0.33
PrnpP04925 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.13■□□□□ 0.33
PrnpP04925 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.13■□□□□ 0.33
PrnpP04925 Gm7506-201ENSMUST00000207758 815 ntBASIC17.13■□□□□ 0.33
PrnpP04925 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.13■□□□□ 0.33
PrnpP04925 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
PrnpP04925 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.13■□□□□ 0.33
PrnpP04925 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PrnpP04925 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.13■□□□□ 0.33
PrnpP04925 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Gm25990-201ENSMUST00000102440 86 ntBASIC17.12■□□□□ 0.33
PrnpP04925 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.12■□□□□ 0.33
PrnpP04925 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.12■□□□□ 0.33
PrnpP04925 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.12■□□□□ 0.33
PrnpP04925 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PrnpP04925 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PrnpP04925 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PrnpP04925 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.12■□□□□ 0.33
PrnpP04925 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PrnpP04925 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PrnpP04925 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.11■□□□□ 0.33
PrnpP04925 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Gm13418-201ENSMUST00000119097 944 ntBASIC17.11■□□□□ 0.33
PrnpP04925 Gm7230-201ENSMUST00000173026 815 ntBASIC17.11■□□□□ 0.33
PrnpP04925 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Gm8000-201ENSMUST00000188378 592 ntBASIC17.11■□□□□ 0.33
PrnpP04925 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.11■□□□□ 0.33
PrnpP04925 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.11■□□□□ 0.33
PrnpP04925 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PrnpP04925 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrnpP04925 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.1■□□□□ 0.33
PrnpP04925 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrnpP04925 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.1■□□□□ 0.33
PrnpP04925 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.1■□□□□ 0.33
PrnpP04925 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrnpP04925 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrnpP04925 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.1■□□□□ 0.33
PrnpP04925 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PrnpP04925 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrnpP04925 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrnpP04925 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PrnpP04925 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
PrnpP04925 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.1■□□□□ 0.33
PrnpP04925 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.1■□□□□ 0.33
PrnpP04925 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PrnpP04925 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PrnpP04925 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.1■□□□□ 0.33
PrnpP04925 Gm5364-201ENSMUST00000216789 889 ntBASIC17.1■□□□□ 0.33
PrnpP04925 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrnpP04925 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.1■□□□□ 0.33
PrnpP04925 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrnpP04925 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms