Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.8□□□□□ -0.04
Hdac3O88895 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Hdac3O88895 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.8□□□□□ -0.04
Hdac3O88895 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.8□□□□□ -0.04
Hdac3O88895 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.8□□□□□ -0.04
Hdac3O88895 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hdac3O88895 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Hdac3O88895 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.8□□□□□ -0.04
Hdac3O88895 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.8□□□□□ -0.04
Hdac3O88895 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.8□□□□□ -0.04
Hdac3O88895 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac3O88895 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Hdac3O88895 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.79□□□□□ -0.04
Hdac3O88895 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.79□□□□□ -0.04
Hdac3O88895 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.79□□□□□ -0.04
Hdac3O88895 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hdac3O88895 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac3O88895 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hdac3O88895 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hdac3O88895 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.78□□□□□ -0.04
Hdac3O88895 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.78□□□□□ -0.04
Hdac3O88895 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.78□□□□□ -0.04
Hdac3O88895 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Gm27463-201ENSMUST00000183569 57 ntBASIC14.78□□□□□ -0.04
Hdac3O88895 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.78□□□□□ -0.04
Hdac3O88895 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Hdac3O88895 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac3O88895 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hdac3O88895 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac3O88895 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hdac3O88895 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Hdac3O88895 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hdac3O88895 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hdac3O88895 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.77□□□□□ -0.05
Hdac3O88895 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hdac3O88895 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hdac3O88895 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hdac3O88895 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hdac3O88895 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Hdac3O88895 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hdac3O88895 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms