Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.69■□□□□ 0.1
Tgfbr3O88393 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Gm25745-201ENSMUST00000174945 133 ntBASIC15.69■□□□□ 0.1
Tgfbr3O88393 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.69■□□□□ 0.1
Tgfbr3O88393 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tgfbr3O88393 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.68■□□□□ 0.1
Tgfbr3O88393 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Tgfbr3O88393 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Gm5364-201ENSMUST00000216789 889 ntBASIC15.68■□□□□ 0.1
Tgfbr3O88393 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.68■□□□□ 0.1
Tgfbr3O88393 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.68■□□□□ 0.1
Tgfbr3O88393 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tgfbr3O88393 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.67■□□□□ 0.1
Tgfbr3O88393 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Mir5126-201ENSMUST00000175513 77 ntBASIC15.67■□□□□ 0.1
Tgfbr3O88393 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Tgfbr3O88393 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Gm8000-201ENSMUST00000188378 592 ntBASIC15.67■□□□□ 0.1
Tgfbr3O88393 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tgfbr3O88393 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tgfbr3O88393 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tgfbr3O88393 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Gm11594-201ENSMUST00000122313 162 ntBASIC15.66■□□□□ 0.1
Tgfbr3O88393 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Gm8969-201ENSMUST00000199694 526 ntBASIC15.66■□□□□ 0.1
Tgfbr3O88393 Gm7506-201ENSMUST00000207758 815 ntBASIC15.66■□□□□ 0.1
Tgfbr3O88393 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.66■□□□□ 0.1
Tgfbr3O88393 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tgfbr3O88393 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms