Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mmp8O70138 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.19■□□□□ 0.82
Mmp8O70138 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mmp8O70138 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.18■□□□□ 0.82
Mmp8O70138 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.18■□□□□ 0.82
Mmp8O70138 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.18■□□□□ 0.82
Mmp8O70138 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.18■□□□□ 0.82
Mmp8O70138 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.18■□□□□ 0.82
Mmp8O70138 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.18■□□□□ 0.82
Mmp8O70138 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp8O70138 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Mmp8O70138 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp8O70138 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.16■□□□□ 0.82
Mmp8O70138 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.16■□□□□ 0.82
Mmp8O70138 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.16■□□□□ 0.82
Mmp8O70138 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Mmp8O70138 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Mmp8O70138 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Mmp8O70138 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp8O70138 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Mmp8O70138 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Mmp8O70138 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Mmp8O70138 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.15■□□□□ 0.82
Mmp8O70138 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Mmp8O70138 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.15■□□□□ 0.82
Mmp8O70138 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Mmp8O70138 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.15■□□□□ 0.82
Mmp8O70138 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.15■□□□□ 0.82
Mmp8O70138 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp8O70138 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mmp8O70138 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp8O70138 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp8O70138 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms