Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
DffaO54786 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DffaO54786 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.33■□□□□ 0.37
DffaO54786 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
DffaO54786 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DffaO54786 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DffaO54786 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DffaO54786 Gm16061-201ENSMUST00000122167 857 ntBASIC17.33■□□□□ 0.36
DffaO54786 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.33■□□□□ 0.36
DffaO54786 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.33■□□□□ 0.36
DffaO54786 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.33■□□□□ 0.36
DffaO54786 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.33■□□□□ 0.36
DffaO54786 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DffaO54786 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DffaO54786 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DffaO54786 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DffaO54786 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
DffaO54786 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DffaO54786 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DffaO54786 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
DffaO54786 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DffaO54786 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.32■□□□□ 0.36
DffaO54786 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
DffaO54786 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
DffaO54786 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.32■□□□□ 0.36
DffaO54786 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
DffaO54786 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
DffaO54786 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
DffaO54786 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.32■□□□□ 0.36
DffaO54786 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
DffaO54786 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
DffaO54786 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
DffaO54786 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DffaO54786 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.31■□□□□ 0.36
DffaO54786 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.31■□□□□ 0.36
DffaO54786 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Gm13186-201ENSMUST00000118031 316 ntBASIC17.31■□□□□ 0.36
DffaO54786 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.31■□□□□ 0.36
DffaO54786 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.31■□□□□ 0.36
DffaO54786 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.31■□□□□ 0.36
DffaO54786 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.31■□□□□ 0.36
DffaO54786 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.31■□□□□ 0.36
DffaO54786 Gm7213-201ENSMUST00000215977 950 ntBASIC17.31■□□□□ 0.36
DffaO54786 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
DffaO54786 Gm10566-201ENSMUST00000086739 996 ntBASIC17.31■□□□□ 0.36
DffaO54786 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
DffaO54786 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DffaO54786 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DffaO54786 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.3■□□□□ 0.36
DffaO54786 Gm13474-201ENSMUST00000122466 815 ntBASIC17.3■□□□□ 0.36
DffaO54786 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.3■□□□□ 0.36
DffaO54786 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.3■□□□□ 0.36
DffaO54786 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffaO54786 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
DffaO54786 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms