Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.91■□□□□ 0.46
Per1O35973 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Per1O35973 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
Per1O35973 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Per1O35973 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Per1O35973 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Per1O35973 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Per1O35973 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Per1O35973 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Per1O35973 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Per1O35973 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.9■□□□□ 0.46
Per1O35973 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Per1O35973 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Per1O35973 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.9■□□□□ 0.46
Per1O35973 Gm44454-201ENSMUST00000198541 138 ntBASIC17.9■□□□□ 0.46
Per1O35973 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Per1O35973 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.9■□□□□ 0.46
Per1O35973 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Per1O35973 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Per1O35973 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Per1O35973 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Per1O35973 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.89■□□□□ 0.45
Per1O35973 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.89■□□□□ 0.45
Per1O35973 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.89■□□□□ 0.45
Per1O35973 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.89■□□□□ 0.45
Per1O35973 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Per1O35973 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Per1O35973 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.88■□□□□ 0.45
Per1O35973 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Per1O35973 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Per1O35973 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.88■□□□□ 0.45
Per1O35973 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.88■□□□□ 0.45
Per1O35973 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Birc2-201ENSMUST00000054878 378 ntBASIC17.88■□□□□ 0.45
Per1O35973 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Per1O35973 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Per1O35973 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.87■□□□□ 0.45
Per1O35973 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Per1O35973 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.87■□□□□ 0.45
Per1O35973 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.87■□□□□ 0.45
Per1O35973 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Per1O35973 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Per1O35973 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Per1O35973 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Per1O35973 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Per1O35973 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.86■□□□□ 0.45
Per1O35973 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Per1O35973 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Per1O35973 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms