Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Lsm2O35900 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Lsm2O35900 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm2O35900 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm2O35900 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm2O35900 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm2O35900 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm2O35900 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm2O35900 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm2O35900 Gm11249-201ENSMUST00000117071 859 ntBASIC14.77□□□□□ -0.05
Lsm2O35900 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.77□□□□□ -0.05
Lsm2O35900 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Gm26571-201ENSMUST00000181399 666 ntBASIC14.77□□□□□ -0.05
Lsm2O35900 Gm37025-201ENSMUST00000195159 829 ntBASIC14.77□□□□□ -0.05
Lsm2O35900 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.77□□□□□ -0.05
Lsm2O35900 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.77□□□□□ -0.05
Lsm2O35900 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.77□□□□□ -0.05
Lsm2O35900 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm2O35900 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.76□□□□□ -0.05
Lsm2O35900 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.76□□□□□ -0.05
Lsm2O35900 Gm37292-201ENSMUST00000192062 758 ntBASIC14.76□□□□□ -0.05
Lsm2O35900 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Lsm2O35900 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Lsm2O35900 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Lsm2O35900 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm2O35900 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Lsm2O35900 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.75□□□□□ -0.05
Lsm2O35900 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.75□□□□□ -0.05
Lsm2O35900 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Lsm2O35900 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Lsm2O35900 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm2O35900 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.74□□□□□ -0.05
Lsm2O35900 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Lsm2O35900 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.74□□□□□ -0.05
Lsm2O35900 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Lsm2O35900 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.74□□□□□ -0.05
Lsm2O35900 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.74□□□□□ -0.05
Lsm2O35900 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Lsm2O35900 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Lsm2O35900 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm2O35900 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms