Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.77■□□□□ 0.44
Nr1i3O35627 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Nr1i3O35627 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Gm13474-201ENSMUST00000122466 815 ntBASIC17.77■□□□□ 0.44
Nr1i3O35627 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.77■□□□□ 0.44
Nr1i3O35627 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1i3O35627 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nr1i3O35627 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nr1i3O35627 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nr1i3O35627 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nr1i3O35627 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nr1i3O35627 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nr1i3O35627 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nr1i3O35627 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nr1i3O35627 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nr1i3O35627 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Nr1i3O35627 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nr1i3O35627 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.76■□□□□ 0.43
Nr1i3O35627 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1i3O35627 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nr1i3O35627 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.75■□□□□ 0.43
Nr1i3O35627 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.75■□□□□ 0.43
Nr1i3O35627 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nr1i3O35627 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Nr1i3O35627 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nr1i3O35627 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1i3O35627 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.74■□□□□ 0.43
Nr1i3O35627 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.74■□□□□ 0.43
Nr1i3O35627 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Nr1i3O35627 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Nr1i3O35627 Gm16061-201ENSMUST00000122167 857 ntBASIC17.74■□□□□ 0.43
Nr1i3O35627 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1i3O35627 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nr1i3O35627 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nr1i3O35627 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nr1i3O35627 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms