Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ercc2O08811 Gm29707-201ENSMUST00000196325 491 ntBASIC16.94■□□□□ 0.3
Ercc2O08811 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.94■□□□□ 0.3
Ercc2O08811 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Ercc2O08811 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ercc2O08811 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ercc2O08811 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ercc2O08811 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc2O08811 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ercc2O08811 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ercc2O08811 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ercc2O08811 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.93■□□□□ 0.3
Ercc2O08811 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ercc2O08811 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ercc2O08811 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.93■□□□□ 0.3
Ercc2O08811 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc2O08811 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ercc2O08811 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Ercc2O08811 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ercc2O08811 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Ercc2O08811 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ercc2O08811 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.92■□□□□ 0.3
Ercc2O08811 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Ercc2O08811 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ercc2O08811 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ercc2O08811 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc2O08811 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.91■□□□□ 0.3
Ercc2O08811 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ercc2O08811 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ercc2O08811 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ercc2O08811 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ercc2O08811 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc2O08811 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ercc2O08811 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ercc2O08811 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ercc2O08811 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ercc2O08811 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.9■□□□□ 0.3
Ercc2O08811 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc2O08811 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms