Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tcof1O08784 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tcof1O08784 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tcof1O08784 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.33■□□□□ 0.69
Tcof1O08784 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tcof1O08784 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.33■□□□□ 0.69
Tcof1O08784 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tcof1O08784 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tcof1O08784 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tcof1O08784 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tcof1O08784 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tcof1O08784 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tcof1O08784 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tcof1O08784 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tcof1O08784 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.32■□□□□ 0.68
Tcof1O08784 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tcof1O08784 Gm18669-201ENSMUST00000216049 778 ntBASIC19.32■□□□□ 0.68
Tcof1O08784 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.32■□□□□ 0.68
Tcof1O08784 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.32■□□□□ 0.68
Tcof1O08784 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Tcof1O08784 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tcof1O08784 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Tcof1O08784 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tcof1O08784 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcof1O08784 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tcof1O08784 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.31■□□□□ 0.68
Tcof1O08784 Gm27357-201ENSMUST00000183754 135 ntBASIC19.31■□□□□ 0.68
Tcof1O08784 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.31■□□□□ 0.68
Tcof1O08784 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.31■□□□□ 0.68
Tcof1O08784 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tcof1O08784 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.31■□□□□ 0.68
Tcof1O08784 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.31■□□□□ 0.68
Tcof1O08784 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcof1O08784 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcof1O08784 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcof1O08784 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Tcof1O08784 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tcof1O08784 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcof1O08784 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tcof1O08784 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcof1O08784 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcof1O08784 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcof1O08784 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcof1O08784 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcof1O08784 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.3■□□□□ 0.68
Tcof1O08784 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcof1O08784 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tcof1O08784 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.29■□□□□ 0.68
Tcof1O08784 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tcof1O08784 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.29■□□□□ 0.68
Tcof1O08784 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tcof1O08784 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcof1O08784 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcof1O08784 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.28■□□□□ 0.68
Tcof1O08784 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcof1O08784 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 126.5 ms