Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.74■□□□□ 0.43
Usp35M0QWN7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp35M0QWN7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp35M0QWN7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp35M0QWN7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Gm17807-201ENSMUST00000186869 298 ntBASIC17.73■□□□□ 0.43
Usp35M0QWN7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Usp35M0QWN7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp35M0QWN7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp35M0QWN7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Gm13216-201ENSMUST00000117145 591 ntBASIC17.71■□□□□ 0.43
Usp35M0QWN7 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.71■□□□□ 0.43
Usp35M0QWN7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Gm37722-201ENSMUST00000193757 208 ntBASIC17.71■□□□□ 0.43
Usp35M0QWN7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp35M0QWN7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp35M0QWN7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp35M0QWN7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp35M0QWN7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.7■□□□□ 0.42
Usp35M0QWN7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Gm17971-201ENSMUST00000190239 806 ntBASIC17.7■□□□□ 0.42
Usp35M0QWN7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Usp35M0QWN7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms