Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 AC154222.1-201ENSMUST00000223882 475 ntBASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Gm3928-201ENSMUST00000121141 1307 ntBASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Gm7222-201ENSMUST00000117512 906 ntBASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc180J3QNE4 Gm12260-201ENSMUST00000122447 411 ntBASIC30.01■■■□□ 2.4
Ccdc180J3QNE4 Gm5682-201ENSMUST00000173402 505 ntBASIC30.01■■■□□ 2.4
Ccdc180J3QNE4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Ccdc180J3QNE4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC30.01■■■□□ 2.4
Ccdc180J3QNE4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Ccdc180J3QNE4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ccdc180J3QNE4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ccdc180J3QNE4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
Ccdc180J3QNE4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ccdc180J3QNE4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ccdc180J3QNE4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ccdc180J3QNE4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ccdc180J3QNE4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ccdc180J3QNE4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ccdc180J3QNE4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ccdc180J3QNE4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Ccdc180J3QNE4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC30■■■□□ 2.39
Ccdc180J3QNE4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ccdc180J3QNE4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
Ccdc180J3QNE4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ccdc180J3QNE4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Ccdc180J3QNE4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ccdc180J3QNE4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ccdc180J3QNE4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC29.99■■■□□ 2.39
Ccdc180J3QNE4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ccdc180J3QNE4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC29.99■■■□□ 2.39
Ccdc180J3QNE4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC29.99■■■□□ 2.39
Ccdc180J3QNE4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Ccdc180J3QNE4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ccdc180J3QNE4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ccdc180J3QNE4 Gm43338-201ENSMUST00000198617 2223 ntBASIC29.98■■■□□ 2.39
Ccdc180J3QNE4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ccdc180J3QNE4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ccdc180J3QNE4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Ccdc180J3QNE4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Gm8784-201ENSMUST00000222096 1435 ntBASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Gm2756-201ENSMUST00000195851 400 ntBASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Gm15590-201ENSMUST00000078419 552 ntBASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc180J3QNE4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Ccdc180J3QNE4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ccdc180J3QNE4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ccdc180J3QNE4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Ccdc180J3QNE4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ccdc180J3QNE4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ccdc180J3QNE4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ccdc180J3QNE4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Ccdc180J3QNE4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ccdc180J3QNE4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Ccdc180J3QNE4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC29.95■■■□□ 2.39
Ccdc180J3QNE4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
Ccdc180J3QNE4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Ccdc180J3QNE4 AC117588.1-201ENSMUST00000228510 999 ntBASIC29.95■■■□□ 2.39
Ccdc180J3QNE4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Ccdc180J3QNE4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Ccdc180J3QNE4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Ccdc180J3QNE4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Ccdc180J3QNE4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ccdc180J3QNE4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ccdc180J3QNE4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ccdc180J3QNE4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms