Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Gm12350-201ENSMUST00000121208 462 ntBASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Gm4535-201ENSMUST00000182274 558 ntBASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Gm27525-201ENSMUST00000184465 107 ntBASIC17.25■□□□□ 0.35
Gm11236J3QMS7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Gm10355-201ENSMUST00000097146 517 ntBASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11236J3QMS7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Gm12497-201ENSMUST00000138778 237 ntBASIC17.24■□□□□ 0.35
Gm11236J3QMS7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm11236J3QMS7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Gm25990-201ENSMUST00000102440 86 ntBASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11236J3QMS7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Gm7230-201ENSMUST00000173026 815 ntBASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Gm9172-201ENSMUST00000212092 954 ntBASIC17.22■□□□□ 0.35
Gm11236J3QMS7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11236J3QMS7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms