Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Rarb-207ENSMUST00000225921 2756 ntBASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Mir7023-201ENSMUST00000185093 64 ntBASIC18.17■□□□□ 0.5
Cntnap3E9PY62 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.17■□□□□ 0.5
Cntnap3E9PY62 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.16■□□□□ 0.5
Cntnap3E9PY62 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap3E9PY62 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Gm7222-201ENSMUST00000117512 906 ntBASIC18.15■□□□□ 0.5
Cntnap3E9PY62 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Gm17271-201ENSMUST00000165535 355 ntBASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntnap3E9PY62 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cntnap3E9PY62 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cntnap3E9PY62 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Gm14127-201ENSMUST00000117906 678 ntBASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Gm44430-201ENSMUST00000203376 995 ntBASIC18.14■□□□□ 0.49
Cntnap3E9PY62 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cntnap3E9PY62 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cntnap3E9PY62 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
Cntnap3E9PY62 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms