Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh17E9PXF0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh17E9PXF0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh17E9PXF0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms