Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.43□□□□□ -0.42
Gm5878E9PUB3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm5878E9PUB3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Gm11539-201ENSMUST00000119837 557 ntBASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.42□□□□□ -0.42
Gm5878E9PUB3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm5878E9PUB3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm5878E9PUB3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm5878E9PUB3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Gm5878E9PUB3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm5878E9PUB3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm5878E9PUB3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm5878E9PUB3 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.4□□□□□ -0.42
Gm5878E9PUB3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm5878E9PUB3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms