Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Gm11950-201ENSMUST00000121615 838 ntBASIC19.35■□□□□ 0.69
Usp42B2RQC2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp42B2RQC2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Gm36967-201ENSMUST00000193814 266 ntBASIC19.34■□□□□ 0.69
Usp42B2RQC2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp42B2RQC2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Usp42B2RQC2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp42B2RQC2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp42B2RQC2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp42B2RQC2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp42B2RQC2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp42B2RQC2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp42B2RQC2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp42B2RQC2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp42B2RQC2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp42B2RQC2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp42B2RQC2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp42B2RQC2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp42B2RQC2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp42B2RQC2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp42B2RQC2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp42B2RQC2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Usp42B2RQC2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp42B2RQC2 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.31■□□□□ 0.68
Usp42B2RQC2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.31■□□□□ 0.68
Usp42B2RQC2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp42B2RQC2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp42B2RQC2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.31■□□□□ 0.68
Usp42B2RQC2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp42B2RQC2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp42B2RQC2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms