Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Mir8117-201ENSMUST00000184773 107 ntBASIC16.96■□□□□ 0.31
Col4a6B1AVK5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.96■□□□□ 0.31
Col4a6B1AVK5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Col4a6B1AVK5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Mir3113-201ENSMUST00000175478 76 ntBASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Chchd1-203ENSMUST00000224633 557 ntBASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a6B1AVK5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a6B1AVK5 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.93■□□□□ 0.3
Col4a6B1AVK5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a6B1AVK5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Gm10576-201ENSMUST00000191927 825 ntBASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms