Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn3aA2ASI5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Scn3aA2ASI5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn3aA2ASI5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn3aA2ASI5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Scn3aA2ASI5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scn3aA2ASI5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Gm27525-201ENSMUST00000184465 107 ntBASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Gm13036-201ENSMUST00000117799 748 ntBASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Gm18195-201ENSMUST00000207604 706 ntBASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Gm9172-201ENSMUST00000212092 954 ntBASIC18.39■□□□□ 0.53
Scn3aA2ASI5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3aA2ASI5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Gm7230-201ENSMUST00000173026 815 ntBASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Mir5131-201ENSMUST00000175426 93 ntBASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Mir6404-201ENSMUST00000183699 94 ntBASIC18.38■□□□□ 0.53
Scn3aA2ASI5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.38■□□□□ 0.53
Scn3aA2ASI5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3aA2ASI5 Gm25990-201ENSMUST00000102440 86 ntBASIC18.37■□□□□ 0.53
Scn3aA2ASI5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3aA2ASI5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3aA2ASI5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Scn3aA2ASI5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms