Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Shroom2A2ALU4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Shroom2A2ALU4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Gm25857-201ENSMUST00000082788 129 ntBASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Gm10616-201ENSMUST00000205285 2127 ntBASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Shroom2A2ALU4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Gm5628-201ENSMUST00000222318 1049 ntBASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Ddx41-204ENSMUST00000224765 2199 ntBASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Gm12151-201ENSMUST00000121374 290 ntBASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shroom2A2ALU4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Gm7336-201ENSMUST00000107041 1232 ntBASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shroom2A2ALU4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shroom2A2ALU4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Rprl2-201ENSMUST00000157150 290 ntBASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Gm38342-201ENSMUST00000195710 2980 ntBASIC26.02■■□□□ 1.76
Shroom2A2ALU4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shroom2A2ALU4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Shroom2A2ALU4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Shroom2A2ALU4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC26.01■■□□□ 1.75
Shroom2A2ALU4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC26.01■■□□□ 1.75
Shroom2A2ALU4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Shroom2A2ALU4 Gm5177-201ENSMUST00000183092 997 ntBASIC26.01■■□□□ 1.75
Shroom2A2ALU4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Shroom2A2ALU4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC26.01■■□□□ 1.75
Shroom2A2ALU4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Shroom2A2ALU4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Shroom2A2ALU4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Shroom2A2ALU4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Shroom2A2ALU4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC26■■□□□ 1.75
Shroom2A2ALU4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Shroom2A2ALU4 Gm10253-201ENSMUST00000194270 940 ntBASIC26■■□□□ 1.75
Shroom2A2ALU4 Gm7774-201ENSMUST00000200064 533 ntBASIC26■■□□□ 1.75
Shroom2A2ALU4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Shroom2A2ALU4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Shroom2A2ALU4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Shroom2A2ALU4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Shroom2A2ALU4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Shroom2A2ALU4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Shroom2A2ALU4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Shroom2A2ALU4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shroom2A2ALU4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Shroom2A2ALU4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Shroom2A2ALU4 Gm13223-201ENSMUST00000118609 747 ntBASIC25.98■■□□□ 1.75
Shroom2A2ALU4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms