Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhgb8A0A140LI48 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhgb8A0A140LI48 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhgb8A0A140LI48 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhgb8A0A140LI48 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhgb8A0A140LI48 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.96□□□□□ -0.02
Pcdhgb8A0A140LI48 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm6433-201ENSMUST00000118634 875 ntBASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhgb8A0A140LI48 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms