Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm15794-201ENSMUST00000120182 631 ntBASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm44430-201ENSMUST00000203376 995 ntBASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm10819-201ENSMUST00000099988 561 ntBASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav5-1A0A075B5Z7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Trav5-1A0A075B5Z7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav5-1A0A075B5Z7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-1A0A075B5Z7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-1A0A075B5Z7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms