Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Gm13436-201ENSMUST00000120418 567 ntBASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav1A0A075B5Z4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Gm18421-201ENSMUST00000204122 625 ntBASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav1A0A075B5Z4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Gm7213-201ENSMUST00000215977 950 ntBASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Gm10566-201ENSMUST00000086739 996 ntBASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav1A0A075B5Z4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms