Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 SETP15-201ENST00000412724 337 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 AL691447.1-201ENST00000419456 387 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 ATP5HP2-201ENST00000433885 485 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 NDUFB1P1-201ENST00000435191 180 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 OR52Y1P-201ENST00000452418 828 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 AC098824.1-201ENST00000453565 980 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 RPL5P16-201ENST00000471467 790 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 UBA52P3-201ENST00000491303 382 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.88□□□□□ -1.47
CLIP1P30622 SNORA70.18-201ENST00000516696 98 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 SNORA70.24-201ENST00000517233 118 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.88□□□□□ -1.47
CLIP1P30622 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.88□□□□□ -1.47
CLIP1P30622 AP003392.5-201ENST00000607857 415 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLIP1P30622 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.88□□□□□ -1.47
CLIP1P30622 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP1P30622 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP1P30622 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP1P30622 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.87□□□□□ -1.47
CLIP1P30622 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP1P30622 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP1P30622 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP1P30622 HIGD1AP12-201ENST00000427832 281 ntBASIC5.87□□□□□ -1.47
CLIP1P30622 RPL7P4-203ENST00000430239 730 ntBASIC5.87□□□□□ -1.47
CLIP1P30622 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.87□□□□□ -1.47
CLIP1P30622 YWHAQP9-201ENST00000445891 512 ntBASIC5.87□□□□□ -1.47
CLIP1P30622 RPL21P23-201ENST00000446654 460 ntBASIC5.87□□□□□ -1.47
CLIP1P30622 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP1P30622 RN7SKP13-201ENST00000515933 244 ntBASIC5.87□□□□□ -1.47
CLIP1P30622 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP1P30622 SUMO2P20-201ENST00000520803 283 ntBASIC5.87□□□□□ -1.47
CLIP1P30622 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP1P30622 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP1P30622 AL442067.2-201ENST00000614033 363 ntBASIC5.87□□□□□ -1.47
CLIP1P30622 AC233309.1-201ENST00000619522 751 ntBASIC5.87□□□□□ -1.47
CLIP1P30622 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP1P30622 AC243312.2-201ENST00000623340 601 ntBASIC5.87□□□□□ -1.47
CLIP1P30622 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP1P30622 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP1P30622 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP1P30622 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP1P30622 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP1P30622 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CLIP1P30622 AC032011.1-201ENST00000611703 1549 ntBASIC5.86□□□□□ -1.47
CLIP1P30622 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP1P30622 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP1P30622 BX119904.1-201ENST00000432026 348 ntBASIC5.86□□□□□ -1.47
CLIP1P30622 AC007967.1-201ENST00000455422 1159 ntBASIC5.86□□□□□ -1.47
CLIP1P30622 snoU13.24-201ENST00000458998 104 ntBASIC5.86□□□□□ -1.47
CLIP1P30622 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
CLIP1P30622 ZNF415P1-201ENST00000582279 1166 ntBASIC5.86□□□□□ -1.47
CLIP1P30622 ELOCP35-201ENST00000604289 336 ntBASIC5.86□□□□□ -1.47
CLIP1P30622 AC091905.1-201ENST00000624400 311 ntBASIC5.86□□□□□ -1.47
CLIP1P30622 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP1P30622 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.86□□□□□ -1.47
CLIP1P30622 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CLIP1P30622 AC083899.2-201ENST00000423285 1376 ntBASIC5.86□□□□□ -1.47
CLIP1P30622 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CLIP1P30622 PRO1804-201ENST00000623780 2050 ntBASIC5.86□□□□□ -1.47
CLIP1P30622 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CLIP1P30622 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.85□□□□□ -1.47
CLIP1P30622 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
CLIP1P30622 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.85□□□□□ -1.47
CLIP1P30622 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.85□□□□□ -1.47
CLIP1P30622 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLIP1P30622 RNVU1-14-201ENST00000384770 164 ntBASIC5.85□□□□□ -1.47
CLIP1P30622 AL391219.1-201ENST00000422570 483 ntBASIC5.85□□□□□ -1.47
CLIP1P30622 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.85□□□□□ -1.47
CLIP1P30622 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.85□□□□□ -1.47
CLIP1P30622 AC090589.1-201ENST00000473109 362 ntBASIC5.85□□□□□ -1.47
CLIP1P30622 AC012123.2-201ENST00000485809 248 ntBASIC5.85□□□□□ -1.47
CLIP1P30622 HNRNPKP5-201ENST00000515300 253 ntBASIC5.85□□□□□ -1.47
CLIP1P30622 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.85□□□□□ -1.47
CLIP1P30622 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLIP1P30622 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLIP1P30622 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.84□□□□□ -1.47
CLIP1P30622 SNORA11C-201ENST00000408532 129 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 CBX1P3-201ENST00000413296 527 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 AC096644.3-201ENST00000416788 338 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 HMGB3P20-201ENST00000417997 600 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 DBIP2-201ENST00000419076 262 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 AC092641.1-201ENST00000440229 772 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 AC092809.1-201ENST00000441469 474 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 AC073587.1-201ENST00000447093 876 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 SNORD105B-201ENST00000458770 79 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 AC010469.1-201ENST00000463864 576 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 AC008155.2-201ENST00000464337 397 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.84□□□□□ -1.47
CLIP1P30622 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.84□□□□□ -1.47
CLIP1P30622 SNORA70.17-201ENST00000516449 133 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.84□□□□□ -1.47
CLIP1P30622 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.84□□□□□ -1.47
CLIP1P30622 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.84□□□□□ -1.47
CLIP1P30622 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.84□□□□□ -1.47
CLIP1P30622 MIR5195-201ENST00000583555 115 ntBASIC5.84□□□□□ -1.47
CLIP1P30622 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.84□□□□□ -1.47
CLIP1P30622 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CLIP1P30622 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms